PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G289300.1.p
Common NamePRUPE_ppa017010mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 155aa    MW: 16593.5 Da    PI: 4.585
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G289300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.60.0002618432654
                        TSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH 26 llPkaskapskKlsKaeiLekAveYIksL 54
                        l       +s  l+Ka+i   A +YIk+L
  Prupe.6G289300.1.p 18 LRAAT---NSNALNKASIIVDASNYIKEL 43
                        33333...6667***************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.22E-51261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-52352IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048732.09E-577144No hitNo description
PROSITE profilePS516719.39278154IPR002912ACT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
MSSGDRKKAV LYHQLQQLRA ATNSNALNKA SIIVDASNYI KELKQKVDTL RQGVGTSTAP  60
NPSPAQVTVE TLERGFLINV LSDKNSPGLL VSILEAFEEL GLDVLDARVS CSDTFQLEAV  120
GGENQGQADS IDAHVVKQAV LQAIQNWSQS SEQD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008245174.11e-109PREDICTED: transcription factor bHLH61-like isoform X1
TrEMBLM5WE191e-107M5WE19_PRUPE; Uncharacterized protein
STRINGVIT_08s0058g00960.t011e-71(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF7241015
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12860.14e-10bHLH family protein